[FeFe]-hydrogenase active site assembly: tracking intermediates in the radical SAM maturase HydE – IRMA
Understanding the chemical processes involved in enzymes is a challenge that requires, in most cases, the use of complementary experimental techniques. This knowledge is often crucial for the development of biotechnological applications. The aim of the IRMA application is to perform a precise structural and temporal characterization, associated with a clear spectroscopic signature of the different radical intermediates involved in the protein HydE. The latter belongs to the so-called radical SAM enzyme superfamily and is a key player in the FeFe hydrogenase active site assembly machinery. To achieve this, we aim at coupling electron paramagnetic resonance and time-resolved serial-crystallography combined with theoretical QM/MM calculations to both establish the chemical mechanism of the enzyme and characterize the structural motions at play. In addition to a fundamental contribution to the understanding of key steps in the reactivity of this enzyme, notably the role of the protein matrix in the control of these processes, the associated methodological developments will open the way to the dynamic structural study of many oxygen-sensitive metalloenzymes. Such implementation of dynamics in structural studies is a major challenge to better understand how these enzymes really work with many potent applications.
Project coordination
Yvain Nicolet (INSTITUT DE BIOLOGIE STRUCTURALE)
The author of this summary is the project coordinator, who is responsible for the content of this summary. The ANR declines any responsibility as for its contents.
Partnership
EUROPEAN SYNCHROTRON RADIATION FACILITY
IBS INSTITUT DE BIOLOGIE STRUCTURALE
SyMMES Systèmes Moléculaires et nano Matériaux pour l'Energie et la Santé
Help of the ANR 650,060 euros
Beginning and duration of the scientific project:
December 2023
- 48 Months