Conception, synthèse et études métaboliques de nouveaux pièges pour la détection de radicaux libres dans les systèmes biologiques – SPIN BioRad
Free Radical detection and characterization in biological systems
Developments in the spin trapping / EPR technique for the detection and the characterization of free radicals in biological systems.
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Since the last decade, it is well established that free radicals play a critical role in normal cell function, in cell signaling, in host defense phenomenon and in various important diseases. Even if their role is well understood in some events, the evidence for radical formation is less certain in other cases. And it is important to better understand if the formation of these species may be a secondary event and irrelevant to the overall biological process. Indeed, there is a critical need of getting details on free radicals, such as their identity, their role and their effects in the biological event under study. As such there is considerable interest in methods that allow the reliable detection and identification of radicals in biological systems. Because the accumulation of free radicals is very low in biological systems, their study is very difficult and challenging. Till now, no method has appeared as the perfect one for the study of such species in biological milieu even if the spin trapping associated to the EPR spectroscopy has shown to be one of the most reliable methods. However, the rapid decay of the generated spin adducts makes challenging its wide application. In the frame of this project, we sought to better understand the factors at the origin of this decay of the EPR signals and we looked for strategies to tackle these limitations by designing new spin traps with improved performances or by using host molecules such as cyclodextrines that will protect the spin adducts by selective inclusion in their cavities. If successful, this work will push the boundaries in the free radical studies in the biomedical field and will bring critical information on the role of free radicals in the etiology of important diseases such as Parkinson and Alzheimer diseases, atherosclerosis, diabetes, cancers and injuries as a result of a stroke.
Two main axes have been developped during this project : 1) Design and synthesis of new spin traps with improvements on i) the lifetime of the spin adducts, ii) the trapping rate of the superoxide radical, iii) the resistance to bioreduction reaction due to glutathione, ascorbate ion or enzymes such as Cytochrome and GPX. To reach these goals, we used theoretical calculations and modeling, organic synthesis (15 new spin traps prepared), physico-chemical studies in order to gain knowledge on the key parameters dealing with spin trapping performances. 2) The second axe was related to metabolic studies and we studied the stability of the superoxide adducts of spin traps in the presence of liver subcellular fractions, biologically relevant reductants and living cells using an original setup combining a stopped-flow device and new protocols allowing a gain in sensitivity.
The project has led to the following developments and results :
- New theoretical model of spin adducts in aqueous phase.
- Design and synthesis of spin traps with improved performances.
- Better understanding of the metabolic degradation of the spin adducts.
- New experimental protocols for the study of free radicals in living cells.
The project has led to a better international visibility of the partners and new international collaborations have been initiated (Medical College of Wisconsin (USA), Lodz University (Pologne)).
The works developped during the project were presented in national and international conferences (8) and has led to 5 articles in high impact journals.
In the last 20 years, the study of Reactive Oxygen and Nitrogen Species (RONS) has appeared as an increasing field of research. This interest is related to their roles as critical mediators in various physiological processes (second messengers and regulators of signal transduction) and pathologies (cancers, neurodegenerative diseases, ischemia / reperfusion damages, diabetes, atherosclerosis). Among these species, the oxygen-centered free radicals are of particular biomedical importance. An accurate technique for the detection of these species is critical for a better understanding of the physiological and pathophysiological processes in which they are implicated. Many methods have been developed to assay O2'- in biochemical, cellular, and in vivo systems such as: cytochrome c reduction, chemiluminescence, fluorescent dyes, hydroethidine oxidation, and nitroblue tetrazolium reduction. Unfortunately, using these techniques it is difficult to discriminate between biological oxidants and O2'-. Beside to above-mentioned techniques, the technique of Electron Paramagnetic Resonance (EPR) spectroscopy allows the detection of free radicals and an extensive characterization of their generation, kinetics, and reactions. Thus, EPR spectroscopy is one of the most powerful techniques for the study of free radicals. However, combinations of rapid decays and low steady-state concentration prevent the direct EPR detection of most biological relevant radicals (e.g., O2'-, NO', HO') under physiological conditions. To circumvent these difficulties, the implication of free radicals can be inferred using the spin trapping technique in which short-lived free radicals specifically react with a nitrone spin trap to form a persistent radical adduct that is conveniently detected by EPR spectroscopy. In 1999, Swartz et al. evaluated DEPMPO, a new spin trap, as spin trapping agent in biological systems and the authors concluded that DEPMPO is a potentially good candidate for trapping radical in biological systems and represents an improvement over DMPO. And more recently, Swartz et al. evaluated the effects of DMPO, CMPO, EMPO, BMPO, and DEPMPO on CHO cells and the stability of the radical adducts in the presence of cells. As a conclusion, the authors indicated that with appropriate controls and selection of spin traps, the spin trapping of reactive free radicals in biological systems is likely to be effective using the newly available spin traps. Since this work, few experiments have been performed successfully in biological systems. The longest half-lives for radical adducts in vivo have been estimated to be around 1 or 2 min with DEPMPO. For the study of free radicals in biological systems, the technique is still limited by the following main drawbacks: - the short lifetime of the superoxide spin adducts, - the readily reduction of nitroxide spin adducts to EPR silent compounds - the low rate constants observed for the trapping of superoxide radical ' the very low steady-state concentration of superoxide radical - the low concentration of the spin trap on the spot of the radical event As a consequence, application of spin trapping technique to in vivo systems is still challenging. There is still a growing need in tools that can provide information on free radical processes occurring in biological systems, and this is illustrated by the incorporation of organic chemists in leading groups involved in free radical biology and in grant proposals focused on this topic. We propose to study the spin trapping of reactive oxygen species in biological systems at the level of theoretical calculations, in buffer solution, in subcellular fractions, in cells and in small animals. These combined studies should allow us to gain insight into the way nitrone spin traps distribute in cells, in the intrinsic mechanism of degradation of the superoxide adduct, on the metabolism of the spin adducts, on the trapping rate of superoxide radical and on the valuable strategies useful to protect the spin adducts in biological systems. We hope to get the following major results: - to develop new spin traps with improved superoxide trapping rate, - to develop a theoretical model to correlate the hyperfine coupling constants to the structure and reactivity of the spin adducts, - to highlight the metabolic pathways of spin adducts, - to enhance the lifetime of the paramagnetic adducts in biological systems, - to determine the important molecular features governing the spin trapping efficiency, - to prepare efficient spin traps to investigate free radical processes in functional biological systems. A the end of the program, we expect that we will be able to offer new improved spin traps for biological systems to the scientific community. The tools and methods that will be developed during the project will be useful also in other fields such as: imaging techniques (PEDRI, OMRI, DNP), therapeutic studies, and immuno-spin trapping technique.
Project coordination
The author of this summary is the project coordinator, who is responsible for the content of this summary. The ANR declines any responsibility as for its contents.
Partnership
Help of the ANR 440,000 euros
Beginning and duration of the scientific project:
- 0 Months