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Revisiting the Population Genetics and Genomics of partially clonal organisms
Clonal reproduction (also named asexuality, i.e. reproduction without genetic modification) is a reproductive mode that has been adopted (at least partially) by a wide variety of organisms across the Tree of Life. Understanding their evolution and dynamics requires a good appraisal of the extent and
Acoustic partnership : vocal communication at the cornerstone of monogamy in birds
The biological basis of social attachment has attracted interest for 15 years. Biology thus joined Human Sciences in the effort towards an understanding of social bonding existing in Humans as well as in many animal social groups. Because of its importance in Human social system, the monogamous pair
Identification of key regulators of lipid plasticity in two major livestock species (pig and chicken) by combined high-throughput technologies, statistics, bioinformatics and phylogenics approaches
Modern farm animal production has to cope with numerous economic, environmental and social concerns. Both the efficiency of feed conversion into meat, egg or milk products, the composition of animal products themselves, and the environmental wastes associated to these productions are important to co
Evolutionary Ecology of the Maternal Transfer of Antibodies
The first objective will be to develop theoretical approaches on the evolutionary issues and eco-epidemiological implications of the maternal transfer of antibodies. This will allow us to investigate feedback loops between ecological and evolutionary processes, notably in relation to the dynamics of
Availability and Degradation of Hydrophobic Organic Compounds in Biofilms
A large fraction of the organic matter consists of hydrophobic organic compounds (HOC) such as lipids and hydrocarbons. The assimilation of these weakly soluble compounds requires the establishment of specialized strategies such as the formation of biofilms at the water-HOC interface. By studying th
Diversity in Human Growth. Growth in African Pygmies
A better knowledge of growth variation in modern humans and its adaptive mechanisms will allow to gain a better understanding of hominid evolution. Our principal aim is to characterise growth in Baka Pygmies. We conduct multidisciplinary data collection and analysis in order to quantify growth (som
ChAnnels and Reactive Oxygen species in Legume root hair: role in Symbiosis with Rhizobium
The root hair plays crucial roles in water and nutrient uptake, and thus in plant development. In Legumes, it also plays a central role in the establishment of the nitrogen-fixing symbiotic interaction with rhizobia, which has a crucial importance for sustainable agriculture as it largely contribute
Genome Interactions and Malaria transmission Efficiency in Anopheles gambiae
The GIME proposal will focus at i) characterization of microbiota in the mosquito larval habitats and midguts and ii) examination of the immune status of A. gambiae in natural populations to determine the effect of exposure to microbiota on the mosquito ability to sustain malaria parasite developmen
Repeated evolution of the mouse tooth: an eco-evo-devo perspective
Repeated evolution is a major feature in evolution, usually interpreted as a similar response to strong similar selective pressures. Yet, conceptual and methodological advances in evolutionary biology and developmental biology increasingly suggest that genetic and developmental networks can favor ce
Mechanisms of iron assimilation in marine micro-algae
Objectives are: 1) To decipher strategies and mechanisms involved in iron uptake by representative marine micro-algae. 2) To Determine how these mechanisms are regulated, as a function of iron availability and of circadian cycles. 3) To identify and characterize molecular components involved in iron
Role of wing chemosensors in fly orientation behavior
We wish to answer a very general —still unanswered— question: what is the importance of insect wings in their orientation to odorant sources? Solving this fundamental question will shed light on the mechanisms underlying insect chemosensory-driven orientation to cues emitted by food sources, conspe
Role and evolution of a potential Sex Determining gene in Salmonids.
In a pure genetic sex determinism system, the master sex determining gene is the inductor of the gonadal sex differentiation process of the embryo leading to the formation of ovaries or testis. Despite many studies in that area, relatively few master sex determining genes have been found and charact
Mobilisation of soil phytate : what are the keys to unlock phosphorus from this treasure ?
Phosphorus (P) is of vital importance for the metabolic requirements for growth and replication and therefore for plant production. However, P is taken up by plants and microorganisms only as orthophosphate (Pi), represented by H2PO4- and HPO42-. Due to its strong capacity to make complexes with cat
Plant sex determination: functional characterization of the monoecy and gynoecy genes in Cucurbitaceae.
How the gender of a flower or plant is determined is an important issue in plant developmental biology. The goal of this proposal is to use the information obtained from the sex determinism genes, recently cloned in melon, as a starting point to understand how the combination of alleles at these two
Vibrios infecting marine invertebrates: new insights into vibrio virulence and their adaptive gene reservoirs
Vibrios are bacteria responsible for a significant proportion of infections affecting marine invertebrates and represent the major cause of mortality in farmed marine species. They are able to colonize many habitats, existing as planktonic forms, in biofilms or associated with various hosts. This hi
ProteoRHOdopsin-containing prokaryotes in Marine EnvirOnments
The overall objecive of the project is to gain significant insights on the role of marine photoheterotrophic bacteria in the ocean carbon cycle. We will first evaluate the contribution of photoheterotrophs to bacterial abundance and activity. The second objective of the project is to perform physio
DNA metabarcoding for next generation biodiversity monitoring
One of the major hurdles in predicting how biological diversity will respond to environmental factors in the 21st century is the current limits to assemble large and standard diversity data that are repeatable over time. Sequencing technologies are currently evolving at a fast pace and should offer
Ecological significance of quorum quenching in the rhizosphere and plant environments
The proposed project aims at investigating the ecological significance of the quorum quenching (QQ) phenomenon that is by definition opposed to quorum sensing (QS). QS is a regulatory mode that couples in bacteria gene expression with cell density. It relies upon the production and sensing of signal
Structure and FUNctioning of HYdrocarbon polluted microbial MATs
One of the greatest challenges facing microbiology today is the task of linking taxonomy and function. Understanding the underlying metabolic mechanisms and regulatory networks as integrated units in complex communities is paramount. The comprehension of the mechanisms of microbial community assembl
Analysis and modelling of gravi and phototropic reactions in trees
In the context of climate changes, mixed and heterogeneous stands are recommended for wood production because they are more resistant to storms. Trees of mixed and heterogeneous stands are subjected to a light environment that can highly vary and induce tropic reactions by the production of reaction
Sensory Ecology of Hybrid Zones in Lentic Environments
The variation of the sensory environment can generate the production of hybrids and induce the divergence of communication systems on the long term (signals, sensory receptors, behaviour). We will test this hypothesis in the Palmate newt and the Smooth newt by analysing sexual preferences in differe
Ecological immunology and immunopathologies : evolutionary perspectives on the inflammation and its regulation.
Parasites impose a permanent threat for hosts. As a consequence, immune defenses are important for host fitness. However, the immune response can also produce self-damage and impair host fitness if not properly regulated. Effectors that up- and downregulate the immune response should, therefore, evo
EVOlutionary and FUNctional analyses of the contribution of the MTP1 gene family to the acquisition of zinc tolerance in Arabidopsis halleri.
. . . The work is still in progress. No data has been published yet. This proposal aims at uncovering the contribution of different members of a gene family to the acquisition of the zinc tolerance trait in the wild zinc tolerant and hyperaccumulating plant species Arabidopsis halleri. As
Plant Odours-Pheromone Interactions for mate localization: cues or noise ?
The survival of an individual and its reproductive success rely on the successful localization of proper food sources, mates, or favourable sites for rearing the progeny. Sensory systems must optimize the processing of input to permit timely and efficient extraction of information. Thus, the olfacto
Evolution of chorusing displays in acoustic animal species
In many species of acoustic animals, males exhibit specialized patterns of collective display. These displays, termed ‘choruses’, range from advertisement signaling during a particular time of the day to precisely adjusted phase relationships between the call rhythms of neighboring individuals. Call
Myctophid assessment in relation to Oceanographic conditions: a three Dimension Density Distribution approach combining Modelling-, Acoustic- and Predators’ data
Lanternfishes (Family Myctophidae) are small luminous species that dominate the mesopelagic fishes of all the world’s oceans. Their large biomass and high nutritional quality make them among the few new fish resources available for commercial fisheries. However, myctophids play a pivotal role in the
Breeding system transitions in flowering plants and their genomic consequences
The diversity and evolution of breeding systems have fascinated evolutionary biologists for long. They are very labile and can evolve rapidly, sometimes in response to human activities; furthermore, they have important evolutionary and ecological consequences. Understanding the causes and consequenc
Evolutionary genetics and mechanisms of plant adaptation and reproductive isolation in aphids
The role of ecological factors and biological adaptations in species formation has gained strong support in the last decade. However, the precise steps involved in the accomplishment of ecological specialization and reproductive isolation are not fully understood and neither is the evolutionary time