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DnaK Sensor System of the Cutaneous Microbiota
A human neurohormone secreted by nerve terminals in the superficial parts of the skin, the CGRP (Calcitonin Gene Related Peptide), has been identified by the laboratory as a factor inducing an increase in the virulence of staphylococci in the skin microbiota (N'Diaye et al. 2016). We have shown that
TREK-1 channel is Activated By Oxidized Omega-3 metabolites
The aim of the project is to find and synthetize new non-enzymatic oxidized metabolites of omega-3 polyunsaturated fatty acids able to activate TREK-1 channel in order to cure pain, epilepsy and/or myocardial infarction. To do so, we have to 1/ identify the oxidized metabolites activating TREK-1; 2/
Biosynthesis of cell wall polysaccharides from brown algae: screening glycosyl transferase activities
Brown algae are large biomass producers in coastal regions. Cultivation projects have increased sharply in Europe, essentially of the kelp Saccharina latissima. Carbohydrates are among the top-value added products and major constituents of this biomass. The main polymers are the alginates and the fu
Ageing and Natural DeAth GenetIc cOntrollers
Thanks to a tool (Smurf Assay) and theoretical framework (Two phases of ageing – 2PAC) developed by this project’s coordinator using the model organism D. melanogaster we now have in our hands 1) an evolutionarily conserved predictor of natural death that we have used to identify a 2) strong transcr
Mechanism for carrier lipid recycling at work during peptidoglycan biogenesis
The peptidoglycan is an essential and specific component of the bacterial cell wall. It consists of long glycan chains crosslinked by short peptide motifs. This semi-rigid polymer surrounds the cytoplasmic membrane, allowing the cell to resist internal osmotic pressure and providing each bacterium a
Discovery of new immunomodulatory lipids of Mycobacterium tuberculosis
As potent immunomodulatory molecules, Mycobacterium tuberculosis (Mtb) (glyco)lipids are key players in host-pathogen interactions. This repertoire has been essentially characterized by studying the composition of the envelope of the bacillus grown in broth culture and with the use of conventional b
The Stable Isotope Labeling Kinetics (SILK) road to investigate human protein turnover in blood and cerebrospinal fluid
Clinical proteomics mostly relies on the absolute quantification of targeted proteins or on global proteome quantification. Although highly successful, this type of analysis does not reveal the turnover (i.e. synthesis and clearance rates) behind the observed abundance, which detailed and tissue-spe
mGlu2 Receptor Signaling in the Brain: Alterations in Preclinical Models for schizophrenia and Interference between Antipsychotics
Schizophrenia affects 1% of the world population. Current treatments poorly control symptoms and induce side effects. A promising new generation of antipsychotics that activate metabotropic glutamate receptor 2 is under clinical trial but first molecules failed due to inference with broadly prescrib
Radical SAM enzymes for innovative RiPP biosynthesis
Ribosomally-synthesized and post-translationally modified peptides (RiPPs) are an emerging class of natural products mainly produced by bacteria. These peptides contain myriad post-translational modifications which confer them with a wide structural diversity and major biological properties (e.g. an
Design of new pyoverdine analogs using synthetic biology approaches
One of the major challenge of the century, the fight against antimicrobial resistance, can be addressed using the emerging field of synthetic biology. One strategy to eradicate multidrug resistant bacteria is to design new antibiotic vectors, more specific and efficient. Siderophores (small peptide
Proteomic and pharmacological approaches to decipher molecular mechanisms regulating endogenous IL-33 protein expression and release
Allergic diseases such as asthma, allergic rhinitis and eczema are common diseases that affect many patients from childhood to adulthood. According to World Health Organization estimates, there are currently 235 million people worldwide who suffer from asthma. It is therefore very important to provi
Novel Fungal Lipids AMinoacylation Systems
Aspergillus fumigatus (Afm) is an opportunistic pathogenic fungus responsible for invasive aspergillosis whose mortality, despite treatment, remains very high in immunocompromised patients or patients with pulmonary pathologies and/or lesions. As with other fungal pathogens, the emergence of resista
Specific recognition of glycosaminoglycans (GAGs) by peptides for cell targeting
Drug delivery into cells is one of the main challenges that faces therapeutical development. Among strategies, peptide-driven delivery has become attractive in the last decades, and consists in the attachment of drugs to a peptide endowed with cell penetrating properties. Although significant achiev
Bacterial Hsp90 chaperone: comprehensive identification of clients to reveal Hsp90 functional roles
In every living organism, protein homeostasis (also called proteostasis) is ensured by a class of proteins called chaperones. One of them, Hsp90, is a very abundant ATP-dependent protein conserved from bacteria to human. In eukaryotes, Hsp90 participates to the folding and activation of hundreds of
Molecular probes for the study of PIMs biosynthesis
Phosphatidyl-myo-inositol mannosides (PIMs) are essential components of the cell wall of mycobacteria. Their biosynthesis starts with the transfer of a mannopyranosyl residue from GDP-Man to the inositol ring of phosphatidylinositol catalyzed by the mannosyltransferase PimA. Then a second mannopyran
Chemical approaches to study the S-palmitoylation of a host factor in Influenza A virus infection
Influenza A viruses remain a serious threat to human health, causing up to 500,000 deaths worldwide each year despite the development of seasonal vaccines and antiviral drugs. Due to its limited coding capacity of ~10 proteins, Influenza A virus (IAV) must highjack the host cellular machinery to per
Actinosynnema: deciphering the mechanisms of long distance metal transport in bacteria
Bacteria are generally thought as isolated cells growing in well-stirred culture media and we tend to forget that they attach to surfaces and form organized structures. This multicellular life is accompanied by challenges such as the acquisition and sharing of micronutrients such as iron or zinc. Th
Challenging Dynamicity of the MYrome with a combination of chemical Tools
N-Myristoylation (MYR) is a major cotranslational and essential N-terminal lipid modification of Eukaryotes. MYR is catalyzed by the enzymes N-Myristoyltransferases (NMT) and consists in the addition of a C:14:0 fatty acid moiety to the N-terminal Glycine (N-Gly) of the target protein. The N-Gly is
Study of the phospholipid metabolism and targeting of an essential enzyme of the malaria parasite.
Malaria is a major global health problem and the main parasitic endemic disease in the world. Recent progress in malaria control is again threatened by the parasite's resistance to the most effective drugs. The development of new antimalarial treatments involving new pharmacological targets remains
Mode of action and bioengineering of RumC sactipeptides to overcome antibiotic resistance of Gram-positive bacteria
Since the discovery of penicillin, humans have widely developed and used antibiotics to protect themselves from microbial infections. However, the intensive use or misused of these compounds has led to the emergence of pathogens resistant to all classes of antibiotics. This major public health threa
Transcriptional control of antibiotic resistance: from basic mechanisms to drugs
Antibiotic-resistant bacteria become a major threat for public health worldwide. Tuberculosis is responsible for ~1,5 million of deaths every year and the number of multi-drug resistant cases increases. Nosocomial infections are responsible for ~ 25 000 deaths a year in the Europe. Development of ne
Functional aspects and physisopathological impact of intracytoplasmic lipid inclusions in mycobacteria
M. tuberculosis, the causative agent of tuberculosis (TB), stores triglycerides (TAG) in the form of Intracytoplasmic Lipid Inclusions (ILI) either within foamy macrophages or inside the granuloma caseum center. These lipid-overloaded bacilli can persist silently within the host and establish a late